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구조-하중 설계를 고려한 공진화 구조 설계시스템
양영순, 유원선, 김봉재 한국전산구조공학회 한국전산구조공학회논문집 10 Pages
한국전산구조공학회 한국전산구조공학회논문집 2003, Vol.16 No.3 281-290 (10 pages)
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Genetic analysis of ORF5 of recent Korean porcine reproductive and respiratory syndrome viruses (PRRSVs) in viremic sera collected from MLV-vaccinating or non-vaccinating farms
Hye Kwon Kim, Jeong Sun Yang, Hyoung Joon Moon, Seong Jun Park, Yuzi Luo, Chul Seung Lee, Dae Sub Song, Bo Kyu Kang, Soo Kyung A 대한수의학회 Journal of Veterinary Science 10 Pages
대한수의학회 Journal of Veterinary Science 2009, 제 10권 제 2호 5 121-130 (10 pages)
reproductive and respiratory syndrome virus. J Gen Virol 1995, 76, 3181-3188. 26. Meulenberg JJ, Petersen-den Besten A, de Kluyver EP, Moormann RJ, Schaaper WM, Wensvoort G. Characteri- zation of structural proteins of Lelystad virus. Adv Exp Med Biol 1995, 380, 271-276. 27. Meulenberg JJ, den Besten AP, de Kluyver E, van Nieuwstadt A, Wensvoort G, Moormann RJM. Molecular characterization of... The 23 open reading frame (ORF) 5 sequences of Korean type II porcine reproductive and respiratory syndrome virus (PRRSV) were collected from viremic sera from the (modified live vaccine) MLV-vaccinating and non-vaccinating farms from 2007 to 2008. The samples were phylogenetically analyzed with previous ORF5 sequences, including type I Korean PRRSV, and previously reported or collected sequences from 1997 to 2008. A MN184-like subgroup of type II Korean PRRSV was newly identified in the viremic... -
Molecular characterization of full-length genome of Japanese encephalitis virus (KV1899) isolated from pigs in Korea
Dong Kun Yang, Byoung Han Kim, Chang Hee Kweon, Jun Hun Kwon, Seong In Lim, Hong Ryul Han 대한수의학회 Journal of Veterinary Science 9 Pages
대한수의학회 Journal of Veterinary Science 2004, 제 5권 제 3호 3 197-205 (9 pages)
5'-end and unpolyadenylated at the 3'-end. The polyprotein is co- or post-translationally processed into structural and non-structural proteins. It has three structural (C, M: a mature form of its precursor protein prM, E) and at least seven non-structural proteins, designated NS1, NS2A, NS2B, NS3, NS4A, NS4B and NS5. Recently, based on analysis of highly variable nucleotide sequence in the prM, E... We have determined the complete nucleotide and deduced amino acid sequences of the Japanese encephalitis virus (JEV) strain KV1899, isolated from a fattening pig in Korea. In comparison with 22 fully sequenced JEV genomes currently available, we found that the 10,963- nucleotide RNA genome of KV1899 has a 13-nucelotide deletion in the 3' non-translated variable region and 53 unique nucleotide sequences including 3' non-translated region (NTR). Its single open reading frame has a total of 28... -
Rapid and Sensitive Detection of Lettuce Necrotic Yellows Virus and Cucumber Mosaic Virus Infecting Lettuce (Lactuca sativa L.) by Reverse Transcription Loop-Mediated Isothermal Amplification
Yubao Zhang, Zhongkui Xie, John D Fletcher, Yajun Wang, Ruoyu Wang, Zhihong Guo, Yuhui He 한국식물병리학회 The Plant Pathology Journal 11 Pages
한국식물병리학회 The Plant Pathology Journal 2020, 36권 1호 7 76-86 (11 pages)
lettuce necrotic yellows virus structural proteins with monoclonal antibodies and concanavalin A. Virology 166:486-494. El-Borollosy, A. M. and Waziri, H. M. A. 2013. Molecular char- acterization of a cucumber mosaic cucumovirus isolated from lettuce in Egypt. Ann. Agric. Sci. 58:105-109. Fletcher, J. D., France, C. M. and Butler, R. C. 2005. Virus sur- veys of lettuce crops and management of... Cucumber mosaic virus (CMV) is damaging to the growth and quality of lettuce crops in Lanzhou, China. Recently, however, for the first time an isolate of lettuce necrotic yellows virus (LNYV) has been detected in lettuce crops in China, and there is concern that this virus may also pose a threat to lettuce production in China. Consequently, there is a need to develop a rapid and efficient detection method to accurately identify LNYV and CMV infections and help limit their spread. Reverse... -
Detection of Clavibacter michiganensis subsp. michiganensis Assisted by Micro- Raman Spectroscopy under Laboratory Conditions
Moisé, s Roberto Vallejo Pé, rez, Hugo Ricardo Navarro Contreras, Jesú, s A. Sosa Herrera, José, Pablo Lara Á, vila 한국식물병리학회 The Plant Pathology Journal 12 Pages
한국식물병리학회 The Plant Pathology Journal 2018, 34권 5호 4 381-392 (12 pages)
a structural part of the Cmm membrane (Saperstein et al., 1954). The chemometric analysis and performance evaluation demonstrated that PCA+LDA was the best classifier algo- rithm with 100% of SENC, SPEC, ACC, PPV and NPV; it was followed by KMeans algorithm applied directly on spectral band values. The classifiers PCA+KMeans algorithm and single LDA alone used as a classifier did not show... a completely randomized block experimental design (13 plants × 4 rows). The Cmm infection was confirmed by 16S rDNA and plants showed symptoms from 48 to 72 h after inoculation, the evolution of the incidence and severity on plant population varied over time and it kept an aggregated spatial pattern. The contagion process reached 79% just 24 days after the epidemic was induced. Micro-Raman spectroscopy proved its speed, efficiency and usefulness as a non-destructive method for the preliminary... -
Computer-Aided Drug Discovery in Plant Pathology
한국식물병리학회 The Plant Pathology Journal 14 Pages
한국식물병리학회 The Plant Pathology Journal 2017, 33권 6호 1 529-542 (14 pages)
of structural and chemical characteristics that molecules must have for binding to the target of interest (Geppert et al., 2010). What LBDD actually does is to build a model (so called, pharmacophore model) based on the knowledge of such molecules binding to the target and, in turn use this model for design of new drug candidates. Fig. 2. The most prominent steps in the SBDD and LBDD... approaches that are being employed in modern drug discovery. In order to help readers to dive into CADD, we explain concepts of homology modelling, molecular docking, virtual screening, and de novo ligand design in structure-based CADD, and pharmacophore modelling, ligand-based virtual screening, quantitative structure activity relationship modelling and de novo ligand design for ligand-based CADD. We also provide the important resources available to carry out CADD. Finally, we present a case... -
Biocontrol Activity of Aspergillus terreus ANU-301 against Two Distinct Plant Diseases, Tomato Fusarium Wilt and Potato Soft Rot
Hyong Woo Choi, S. M. Ahsan 한국식물병리학회 The Plant Pathology Journal 13 Pages
한국식물병리학회 The Plant Pathology Journal 2022, 38권 1호 4 33-45 (13 pages)
V. E. 2014. Bacterial pectate lyases, structural and functional diver- sity. Environ. Microbiol. Rep. 6:427-440. Hussain, F., Hussain, I., Khan, A. H. A., Muhammad, Y. S., Iqbal, M., Soja, G., Reichenauer, T. G. and Yousaf, S. 2018. Combined application of biochar, compost, and bacterial consortia with Italian ryegrass enhanced phytoremediation of petroleum hydrocarbon contaminated soil.... To screen antagonistic fungi against plant pathogens, dual culture assay (DCA) and culture filtrate assay (CFA) were performed with unknown soil-born fungi. Among the different fungi isolated and screened from the soil, fungal isolate ANU-301 successfully inhibited growth of different plant pathogenic fungi, Colletotri- chum acutatum, Alternaria alternata, and Fusarium oxysporum, in DCA and CFA. Morphological character- istics and rDNA internal transcribed spacer sequence analysis identified... -
Evaluation of infectivity and transmission of different Asian foot-and-mouth disease viruses in swine
Juan M. Pacheco, P. W. Mason 대한수의학회 Journal of Veterinary Science 10 Pages
대한수의학회 Journal of Veterinary Science 2010, 제 11권 제 2호 7 133-142 (10 pages)
the non-structural viral protein 3A, which is associated with the inability of this virus to replicate or grow in bovine cells in culture [5,21,29]. We have also reported that this deletion is associated with attenuation in cattle but not in pigs [5,33]. This shortened form of 3A is characteristic of one topotype of Asian viruses [21], designated the Cathay topotype [37]. Interestingly, the... Most isolates of foot-and-mouth disease virus (FMDV) display a broad host range. Since the late 1990s, the genetic lineage of PanAsia topotype FMDV serotype O has caused epidemics in the Far East, Africa, the United Kingdom, France, the Netherlands, and numerous other countries throughout Europe and Asia. In contrast, there are several FMDV isolates that exhibit a more restricted host range. A Cathay topotype isolate of FMDV serotype O from the 1997 epizootic in Taiwan (O/TAW/97) demonstrated... -
하중의 불확실성을 고려한 선형구조제어 시스템의 최적설계
박원석, 박관순, Park. Won-Suk, Park. Kwan-Soon 한국지진공학회 한국지진공학회논문집 9 Pages
한국지진공학회 한국지진공학회논문집 2011, Vol.15 No.2 1-9 (9 pages)
불확실성을 가지는 하중의 변동성을 고려한 구조제어시스템의 최적설계방법에 관하여 연구하였다. 일반적인 제어시스템의 설계 문제가 구조물과 제어시스템간의 상호작용 고려하여 구조-제어 시스템을 최적화이나, 이 연구에서는 하중-구조물-제어 시스템간의 상호작용에 대한 최적설계방법에 관하여 다루었다. 구조물의 응답을 최대화하는 하중과, 이를 최소화하는 구조제어시스템을 동시에 구하는 최대-최소문제(Min-max Problem)를 정식화하고, 최적설계변수를 효율적으로 찾는 방법으로 병렬진화 알고리즘을 이용하여 불확실성이... -
Identification of determinants that mediate binding between Tembusu virus and the cellular receptor heat shock protein A9
Dongmin Zhao, Qingtao Liu, Xinmei Huang, Huili Wang, Kaikai Han, Jing Yang, Keran Bi, Yuzhuo Liu, Lijiao Zhang, Yin Li 대한수의학회 Journal of Veterinary Science 8 Pages
대한수의학회 Journal of Veterinary Science 2018, 제 19권 제 4호 8 528-535 (8 pages)
diseases in humans and animals [2]. The genome of flaviviruses is approximately 11 kb, containing a single open reading frame and encoding a polyprotein. The polyprotein is processed into three structural proteins (capsid [C], membrane [M], and envelope [E]) and seven nonstructural proteins (NS1, NS2a, NS2b, NS3, NS4a, NS4b, and NS5) by viral and cellular proteases [39]. The E protein is a... Heat shock protein A9 (HSPA9), a member of the heat shock protein family, is a putative receptor for Tembusu virus (TMUV). By using Western blot and co-immunoprecipitation assays, E protein domains I and II were identified as the functional domains that facilitate HSPA9 binding. Twenty-five overlapping peptides covering domain I and domain II sequences were synthesized and analyzed by using an HSPA9 binding assay. Two peptides showed the capability of binding to HSPA9. Dot blot assay of...