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A novel low-cost method for Mycobacterium avium subsp. paratuberculosis DNA extraction from an automated broth culture system for real-time PCR analysis
Miguel Salgado*, Cristobal Verdugo, Cord Heuer, Pedro Castillo, Patricia Zamorano 대한수의학회 Journal of Veterinary Science 7 Pages
대한수의학회 Journal of Veterinary Science 2014, 제 15권 제 2호 9 233-239 (7 pages)
The final PCR results for 11 samples analyzed with the QIAamp and UACH methods or ones examined with the QIAamp and CTAB methods were in agreement. Complete (100%) agreement was observed between data from the CTAB and UACH methods. CP values for the UACH and CTAB techniques were not significantly different, while the UACH method yielded significantly lower CP values compared to the QIAamp kit. The proposed extraction method combines reliability and efficiency with simplicity and lower cost. -
Evaluation of PCR inhibitory effect of enrichment broths and comparison of DNA extraction methods for detection of Salmonella Enteritidis using real-time PCR assay
Ji-Yeon Hyeon, In-Gyun Hwang, Hyo-Sun Kwak, Chankyu Park, In-Soo Choi, Kun-Ho Seo 대한수의학회 Journal of Veterinary Science 7 Pages
대한수의학회 Journal of Veterinary Science 2010, 제 11권 제 2호 8 143-149 (7 pages)
The best enrichment broth and DNA extraction scheme was determined for rapid and sensitive detection of Salmonella Enteritidis in steamed pork using real-time PCR. The inhibitory effect of commonly used Salmonella enrichment broths, Rappaport-Vassiliadis (RV) and Muller-Kauffmann tetrathionate with novobiocin (MKTTn), on real-time PCR was confirmed. The inhibition of PCR was statistically significant (p < 0.05) in RV and MKTTn, as compared with buffered peptone water (BPW) or phosphate-buffered... -
Short Communication : Effective DNA extraction method to improve detection of Mycobacterium avium subsp. paratuberculosis in bovine feces
Hong Tae Park , Min Kyoung Shin , Kyung Yong Sung , Hyun Eui Park , Yong Il Cho , Han Sang Yoo 대한수의학회 Korean Journal of Veterinary Research(구 대한수의학회지) 3 Pages
대한수의학회 Korean Journal of Veterinary Research(구 대한수의학회지) 2014, 제 54권 제 1호 10 55-57 (3 pages)
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Simple and Reliable DNA Extraction Method for the Dark Pigmented Fungus, Cercospora sojina
한국식물병리학회 The Plant Pathology Journal 4 Pages
한국식물병리학회 The Plant Pathology Journal 2010, 26권 3호 15 289-292 (4 pages)
the plant pathogenic fungus Cercospora sojina. Total DNA yield obtained by this method was approximately 1 mg/g of mycelia (fresh weight), and the mean ratio of A260/A280 and A260/A230 were 2.04 and 2.1, respectively. The results of random amplified polymorphic DNA (RAPD) analysis, digestion with restriction enzymes, and Southern hybridization indicated that polysaccharides were effectively removed by this method, and the resulting DNA was sufficient for use in subsequent molecular analysis. -
A Quick and Safe Method for Fungal DNA Extraction
한국식물병리학회 The Plant Pathology Journal 4 Pages
한국식물병리학회 The Plant Pathology Journal 2009, 25권 1호 17 108-111 (4 pages)
including cloning and genotyping, have become routine in fungal research laboratories. However, preparation of high-quality DNA from fungal tissue requires much time and labor and is often a limiting step for high-throughput experiments. We have developed a quick and safe (QS) DNA extraction method for fungi. Time efficiency and safety in the QS method were achieved by using plate-grown mycelia as the starting material, by eliminating phenol-chloroform extraction procedures, and by deploying a... -
A Simple Method for Extraction of High Molecular Weight DNA fromPorphyra Tenera (Rhodophyta) Using Diatomaceous Earth
김태훈, 황미숙, 송주동, 오민혁, 문용환, 정익교, 류태형, 이춘환, Kim. Tae-Hoon, Hwang. Mi-Sook, Song. Ju-Dong, Oh. Min-Hyuk, Moon. Yong-Hwan, Chung. Ik-Kyo, Rhew. Tae- 한국조류학회(藻類) Algae 6 Pages
한국조류학회(藻類) Algae 2006, Vol.21 No.2 261-266 (6 pages)
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A Simple Method for DNA Extraction from Red Algae
이유경, 이홍금, Lee. Yu Gyeong, Lee. Hong Geum 한국조류학회(藻類) Algae 5 Pages
한국조류학회(藻類) Algae 2003, Vol.18 No.1 65-69 (5 pages)
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Direct Extraction of DNA from Soil for Amplification of 16S rRNA Gene Sequences by Polymerase Chain Reaction
Cho. Jae-Chang, Lee. Dong-Hun, Cheol. Cho-Young, Cho. Jang-Cheon, Kim. Sang-Jong 한국미생물학회 The journal of microbiology 7 Pages
한국미생물학회 The journal of microbiology 1996, Vol.34 No.3 229-235 (7 pages)
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An Easy, Rapid, and Cost-Effective Method for DNA Extraction from Various Lichen Taxa and Specimens Suitable for Analysis of Fungal and Algal Strains
Park. Sook-Young, Jang. Seol-Hwa, Oh. Soon-Ok, Kim. Jung A, Hur. Jae-Seoun 한국균학회 Mycobiology 6 Pages
한국균학회 Mycobiology 2014, Vol.42 No.4 311-316 (6 pages)
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Detection of Mycobacterium bovis in the lymph node of tuberculin positive cattle by guanidium isothiocyanate/silica DNA extraction and polymerase chain reaction
Cho. Yun-Sang, Jung. Suk-Chan, Yoo. Han-Sang, Kim. Jong-Man 한국가축위생학회 韓國家畜衛生學會誌 9 Pages
한국가축위생학회 韓國家畜衛生學會誌 2007, Vol.30 No.2 233-241 (9 pages)
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Effective Method for Extraction of Cell-Free DNA from Maternal Plasma for Non-Invasive First-Trimester Fetal Gender Determination: A Preliminary Study
Lim. Ji-Hyae, Park. So-Yeon, Kim. Shin-Young, Kim. Do-Jin, Kim. Mee-Jin, Yang. Jae-Hyug, Kim. Moon-Young, Kim. Min-Hyoung, Han. Ho-Won, C 대한의학유전학회 Journal of genetic medicine 6 Pages
대한의학유전학회 Journal of genetic medicine 2010, Vol.7 No.1 53-58 (6 pages)
정량 형광-중합효소 연쇄 반응(QF-PCR)을 이용하여SRY 와AMXY 유전자를 검출하였다. QF-PCR의 진단 정확도는 최종 분만 기록을 토대로 결정하였다. 결 과: 전체 44명의 여성이 실험에 참여하였지만, 최종 분만 기록은 단지 36명의 여성에서 획득하였다. 이들 중 16명은 남아를 20명은 여아를 임신하였다. 두 추출 방법에서 태아 성별의 진단적 정확도는 일반 혈액 DNA 추출 방법에 경우 63.9% (23/26)였으며 viral DNA 추출 방법에 경우 97.2% (35/36) 였다. 결 론: QF-PCR을 이용한 비침습적 임신초기 태아 성별 확인에 있어 viral kit를... -
Rapid Detection of Pathogens Associated with Dental Caries and Periodontitis by PCR Using a Modified DNA Extraction Method
김재환, 김미아, 이대우, 백병주, 양연미, 김재곤, Kim. Jaehwan, Kim. Miah, Lee. Daewoo, Baik. Byeongju, Yang. Yeonmi, Kim. Jaegon 대한소아치과학회 大韓小兒齒科學會誌 6 Pages
대한소아치과학회 大韓小兒齒科學會誌 2014, Vol.41 No.4 292-297 (6 pages)
외의 방법은 페놀과 클로로포름과 같은 유해한 화학물질을 써야하는 등의 단점이 있다. 이 연구에서 NaOH 용액을 이용한 개선된 DNA 추출 방법은 치아우식증, 치주염과 관련된 병원체를 빠르고 간단하며 비용-효율적으로 검출하였다. 세균으로부터 DNA를 추출하기 위한 boiling은 기존의 10분이 아닌 1분으로 충분하였고 $4^{circ}C$에서 최소 13개월 이상 DNA의 보관이 가능하였으며 sonication 유무에 따른 차이는 없었다. 따라서, 이 방법은 상업적인 kit나 유해한 화학물질을 쓰지 않고서도 타액 표본으로부터 직접적으로 빠른 시간... -
Imported Malaria in United Arab Emirates: Evaluation of a New DNA Extraction Technique Using Nested PCR
Sultan. Doaa M., Khalil. Marwa M., Abdouh. Ahmed S., Doleh. Wafaa F., AI Muthanna. Abdul Aziz M. 대한기생충학회 The Korean journal of parasitology 7 Pages
대한기생충학회 The Korean journal of parasitology 2009, Vol.47 No.3 227-233 (7 pages)
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Improved immunogenicity of Newcastle disease virus inactivated vaccine following DNA vaccination using Newcastle disease virus hemagglutinin-neuraminidase and fusion protein genes
Masoumeh Firouzamandi, Hassan Moeini, Davood Hosseini, Mohd Hair Bejo, Abdul Rahman Omar, Parvaneh Mehrbod, Aini Ideris 대한수의학회 Journal of Veterinary Science 6 Pages
대한수의학회 Journal of Veterinary Science 2016, 제 17권 제 1호 3 21-26 (6 pages)
The present study describes the development of DNA vaccines using the hemagglutinin-neuraminidase (HN) and fusion (F) genes from AF2240 Newcastle disease virus strain, namely pIRES/HN, pIRES/F and pIRES-F/HN. Transient expression analysis of the constructs in Vero cells revealed the successful expression of gene inserts in vitro. Moreover, in vivo experiments showed that single vaccination with the constructed plasmid DNA (pDNA) followed by a boost with inactivated vaccine induced a significant... -
Positive effects of porcine IL-2 and IL-4 on virus-specific immune responses induced by the porcine reproductive and respiratory syndrome virus (PRRSV) ORF5 DNA vaccine in swine
Deyuan Tang*, Jian Liu, Chunyan Li, Hua Zhang, Ping Ma, Xianfeng Luo, Zhiyong Zeng, Nining Hong, Xia Liu, Bin Wang, Feng Wang, Z 대한수의학회 Journal of Veterinary Science 11 Pages
대한수의학회 Journal of Veterinary Science 2014, 제 15권 제 1호 11 99-109 (11 pages)
porcine reproductive and respiratory syndrome virus ORF5 DNA vaccine in piglets. Eukaryotic expression plasmids pcDNA-ORF5, pcDNA-IL-2, and pcDNA-IL-4 were constructed and then expressed in Marc-145 cells. The effects of these genes were detected using an indirect immunofluorescent assay and reverse transcription polymerase chain reaction (RT-PCR). Characteristic fluorescence was observed at different times after pcDNA- ORF5 was expressed in the Marc-145 cells, and PCR products corresponding to... -
Development of a monoclonal antibody against deoxynivalenol for magnetic nanoparticle-based extraction and an enzyme-linked immunosorbent assay
Hyuk-Mi Lee, Sung-Ok Song, Sang-Ho Cha, Sung-Bok Wee, Karyn Bischoff, Sung-Won Park, Seong-Wan Son, Hwan-Goo Kang*, Myung-Haing 대한수의학회 Journal of Veterinary Science 8 Pages
대한수의학회 Journal of Veterinary Science 2013, 제 14권 제 2호 5 143-150 (8 pages)
(0 to 1,000 mg/kg) ranged from 68.34 to 95.49% (CV; 4.10 to 13.38%). DON in a buffer solution (250, 500 and 1,000 ng/mL) was isolated using 300 μg of NVRQS-DON and 3 mg of magnetic nanoparticles (MNPs). The mean recovery rates of DON using this mAb-MNP system were 75.2, 96.9, and 88.1% in a buffer solution spiked with DON (250, 500, and 1,000 ng/mL). Conclusively we developed competitive ELISAs for detecting DON in animal feed and created a new tool for DON extraction using mAb-coupled MNPs. -
Simultaneous detection and subtyping of porcine endogenous retroviruses proviral DNA using the dual priming oligonucleotide system
Hyoung-Joon Moon, Seong-Jun Park, Hye-Kwon Kim, Soo-Kyung Ann, Semi Rho, Hyun-Ok Keum, Bong-Kyun Park* 대한수의학회 Journal of Veterinary Science 3 Pages
대한수의학회 Journal of Veterinary Science 2010, 제 11권 제 3호 14 269-271 (3 pages)
detected the PERV proviral genes pol, envA, envB, envC, and porcine mitochondrial DNA only in samples of pig origin. The sensitivity of the primer was demonstrated by simultaneous amplification of all 5 target genes in as little as 10 pg of pig DNA containing PERV proviral genes and mitochondrial DNA. The multiplex PCR, when applied to field samples, simultaneously and successfully amplified PERV proviral genes from liver, blood and hair root samples. Thus, the multiplex PCR developed in the... -
Inhibitory effects of interleukin-10 plasmid DNA on the development of atopic dermatitis-like skin lesions in NC/Nga mice
Bock-Gie Jung, Sun-Ju Cho, Jae-Hyung Ko, Bong-Joo Lee* 대한수의학회 Journal of Veterinary Science 8 Pages
대한수의학회 Journal of Veterinary Science 2010, 제 11권 제 3호 6 213-220 (8 pages)
1 and Th2 cells. Previous studies have reported that IL-10 can ameliorate various inflammatory disorders. The present study was performed to examine whether IL-10 plasmid DNA could suppress development of atopic dermatitis (AD)-like skin lesions in NC/Nga mice, as an initial step towards the development of an appliance for use in dogs with AD. Intradermal injection of IL-10 plasmid DNA markedly inhibited the development of AD-like skin lesions, as evidenced by a marked decrease in skin symptoms... -
Parentage testing of Thoroughbred horse in Korea using microsatellite DNA typing
Sun-young Lee, Gil-jae Cho 대한수의학회 Journal of Veterinary Science 5 Pages
대한수의학회 Journal of Veterinary Science 2006, 제 7권 제 1호 11 63-67 (5 pages)
sires and 314 dams for individual identification were genotyped.Genomic DNA was extracted from 5 hair roots and genotyped by using 14 microsatellite markers (AHT4, AHT5, ASB2, ASB17, ASB23, CA425, HMS1, HMS3, HMS6, HMS7, HTG4, HTG10, LEX3 and VHL20). This method consisted of multiplexing PCR procedure and showed reasonable amplification of all PCR products. Genotypes were determined by genetic analyzer. The number of alleles per locus varied from 3 to 9 with a mean value of 6.36 in TB horse.The... -
Microbiology,Immunology : Quantification and genotyping of PCV2 DNA in the tissues of PCV2-infected conventional pigs with different clinical signs
Bong Kyun Park , Seong Jun Park , Hye Kwon Kim , Yu Zi Luo , Hyoung Joon Moon , Se Mi Rho , Jae Yeon Han , Van Giap Nguy 대한수의학회 Korean Journal of Veterinary Research(구 대한수의학회지) 8 Pages
대한수의학회 Korean Journal of Veterinary Research(구 대한수의학회지) 2011, 제 51권 제 1호 2 7-14 (8 pages)
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Knockdown of RCAN1.4 Increases Susceptibility to FAS-mediated and DNA-damage-induced Apoptosis by Upregulation of p53 Expression
YoungSunKim, HongJoonLee, ChorongJang, Ho-ShikKim, , Young-JinCho 대한생리학회-대한약리학회 The Korean Journal of Physiology & Pharmacology 7 Pages
대한생리학회-대한약리학회 The Korean Journal of Physiology & Pharmacology 2009, Vol.13 No.6 12 483-489 (7 pages)
Despite the potential importance of the human regulator of calcineurin 1 (RCAN-1) gene in the modulation of cell survival under stress, little is known about its role in death-inducing signal pathways. In this study, we addressed the effects of RCAN1.4 knockdown on cellular susceptibility to apoptosis and the activation of death pathway proteins. Transfection of siRNAs against RCAN1.4 resulted in enhanced Fas- and etoposide-induced apoptosis, which was associated with increased expression and... -
Rifampicin Inhibits the LPS-induced Expression of Toll-like Receptor 2 via the Suppression of NF-κB DNA-binding Activity in RAW 264.7 Cells
SeongKeunKim, YoungMiKim, ChungEunYeum, Song-HyoJin, GueTaeChae, Seong-BeomLee 대한생리학회-대한약리학회 The Korean Journal of Physiology & Pharmacology 8 Pages
대한생리학회-대한약리학회 The Korean Journal of Physiology & Pharmacology 2009, Vol.13 No.6 11 475-482 (8 pages)
is a major transcription factor that regulates genes for TLR2 and TNF-Ձ, we examined the effect of rifampicin on the LPS-induced NF-ՊB activation. Rifampicin inhibited NF-ՊB DNA-binding activity in LPS-activated RAW 264.7 cells, while it did not affect IKKՁ/Ղ activity. However, rifampicin slightly inhibited the nuclear translocation of NF-ՊB p65. In addition, rifampicin increased physical interaction between pregnane X receptor, a receptor for rifampicin, and... -
The Regulation of AP-1 DNA Binding Activity by Long-term Nicotine Stimulation in Bovine Adrenal Medullary Chromaffin Cells Role of Second Messengers
Jin-KooLee, Seong-SooChoi, Hong-WonSuh 대한생리학회-대한약리학회 The Korean Journal of Physiology & Pharmacology 4 Pages
대한생리학회-대한약리학회 The Korean Journal of Physiology & Pharmacology 2002, Vol.6 No.2 7 109-112 (4 pages)
of AP-1 DNA binding activity in long-term nicotine stimulated bovine adrenal medullary chromaffin (BAMC) cells have not been well characterized. To understand the involvement of second messengers in the regulation of AP-1 DNA binding activity, the present study was designed to define the time-course for inhibition of nicotine-induced responses by cholinergic antagonists, Ca2 and calmodulin (CaM) antagonists, and calcium/calmodulin-dependent protein kinase (CaMK) II inhibitor using... -
Epinephrine 합성효소인 phenylethanolamine N-methyltransferase의 인간 genomic DNA의 유전자 크로닝
서유현(Yoo Hun Suh), 허성오(Sung Oh Huh), 전양숙(Yang Sook Chun), 김현식(Hun Sik Kim), 임정규(Jung Kyoo Lim), 박찬웅(Chan Woong Park) 대한약리학회 대한약리학잡지 10 Pages
대한약리학회 대한약리학잡지 1988, 제 24권 제 1호 1 1-10 (10 pages)
외에는 아직까지 인간 PNMT cDNA나, 전체 genomic DNA의 분리 보고는 없다. 이에 저자들은 인간 PNMT유전자의 전체구조와 여러 종(species) 사이의 진화적인 관계를 규명하기 위해서 human genomic library(Charon 4A)를 만들고, 이 library 이용하여 bovine cDNA를 probe로 13.1 Kb길이의 genomic clone을 분리 크로닝하는데 성공하였다. 이 유전자는 두개의 EcoRI site가 포함되어 있어서, EcoRI제한효소에 의해서 7.5 Kb, 5.0 Kb,0.6 Kb로 분리되었으며, Southern과 dot blot 실험 에서 보면 5.0 Kb와 0.6 Kb에 exon이 흩어져 존재하고... -
Development and Evaluation of Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Tylenchulus semipenetrans Using DNA Extracted from Soil
한국식물병리학회 The Plant Pathology Journal 9 Pages
한국식물병리학회 The Plant Pathology Journal 2017, 33권 2호 10 184-192 (9 pages)
a loop-mediated isothermal amplification (LAMP) assay was developed to detect T. semipenetrans using DNA extracted from soil. A set of five primers was designed from the internal transcribed spacer region (ITS1) of rDNA, and was highly specific to T. semipenetrans. The LAMP reaction was performed at 63°C for 60 min. The LAMP product was visualized directly in one reaction tube by adding SYBR Green I. The detection limit of the LAMP assay was 10 J2/0.5 g of soil, which was 10 times more... -
DNA Microarray and Gene Ontology Enrichment Analysis Reveals That a Mutation in opsX Affects Virulence and Chemotaxis in Xanthomonas oryzae pv. oryzae
한국식물병리학회 The Plant Pathology Journal 11 Pages
한국식물병리학회 The Plant Pathology Journal 2016, 32권 3호 3 190-200 (11 pages)
a saccharide biosynthesis regulatory protein, on the virulence and bacterial chemotaxis of Xoo. We performed DNA microarray analysis, which showed that 63 of 2,678 genes, including genes related to bacterial motility (flagellar and chemotaxis proteins) were significantly downregulated (<−2 log;sub>2;/sub> fold changes) by the mutation in opsX. Indeed, motility assays showed that the mutant strain was nonmotile on semisolid agar swarm plates. In addition, a mutant strain... -
Microwave Irradiation-assisted RNA Extraction from Woody Tissues for Plant Virus Detection
한국식물병리학회 The Plant Pathology Journal 3 Pages
한국식물병리학회 The Plant Pathology Journal 2010, 26권 3호 14 286-288 (3 pages)
method, however, is both time-consuming and expensive. Additionally, homogenization may generate excessive endogenous RNases, polyphenolics, and other substances that reduce the quality and quantity of RNA. In this study, we describe the microwave irradiation-assisted RNA extraction (MIRE) technique which, without tissue disruption and homogenization, allows for the cost-effective and rapid generation of intact RNA from apple cane shavings and the reliable detection of apple virus by RT-PCR. -
중형저서동물에서 효율적인 DNA 추출 방법 비교 연구
이승한, 백진욱, 이원철, Lee. Seung-Han, Back. Jin-Wook, Lee. Won-Choel 한국환경생물학회 환경생물 6 Pages
한국환경생물학회 환경생물 2011, Vol.29 No.3 138-143 (6 pages)
처리하였을 때, 고정액의 종류에 따른 DNA (mtCOI)의 추출 효율을 비교하고자 하였다. 실험을 위해 저서성 요각류 Tigriopus japonicus s.l.를 실험동물로 사용하였으며, 99% 에탄올과 4%포르말린의 두 종류의 고정액을 사용한 뒤 이들을 각각 대조구로 삼았다. 그리고 (1) Ludox HS40, (2) Rose Bengal, (3) Ludox HS40+Rose Bengal을 각각 시료와 반응시킨뒤, mtCOI 유전자를 추출하였다. 이후 PCR을 진행하고 산물을 전기영동하여 유전자의 증폭여부를 확인하였다. 또한 모든 실험은 30회 반복하여 실험간의 결과를 비교 하였다. 그... -
토양 및 퇴적토 환경 시료로부터 DNA 추출하는 방법에 대한 고찰
유근제, 이재진, 박준홍, Yoo. Keun-Je, Lee. Jae-Jin, Park. Joon-Hong 한국지하수토양환경학회 지하수토양환경 11 Pages
한국지하수토양환경학회 지하수토양환경 2009, Vol.14 No.3 57-67 (11 pages)
대한 다양한 기초연구가 이루어졌지만, 실제 환경생태영향평가와 분해기능평가에 사용시 DNA추출방법 선정에 대한 지침 및 정보는 매우 부족하다. 이에 본 연구에서는 문헌조사를 통해서 다양한 방법들의 토양 및 퇴적토 내 미생물 DNA 추출 특성을 비교 분석하고, 현재 주로 사용되고 있는 DNA추출방법을 토양 및 퇴적토 환경평가나 오염지하수토양 자연저감능평가에 활용 할 경우 고려해야 할 기술적 사항에 대해 고찰하였다. 본 연구를 통해 하나의 특정 추출 방법으로는 미생물다양성, 군집구성 및 개체간 상호작용에 대한 정보를... -
대량의 쌀 시료 분석을 위한 DNA 추출법
최영덕, 이해광, 이윤숙, 윤정희, 김수정, 박성환, Choi. Young-Deok, Lee. Hae-Kwang, Lee. Yun-Suk, Yun. Jeong-Hee, Kim. Su-Jeong, Park. Seong-Whan 한국작물학회 Korean journal of crop science 5 Pages
한국작물학회 Korean journal of crop science 2006, Vol.51 269-273 (5 pages)
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다섯 가지 DNA 추출방법에 의한 옥수수 원료 및 가공시료의 DNA 추출 효율의 비교
이훈희, 송희성, 김재환, 이우영, 이순호, 박선희, 박혜경, 김해영, Lee. Hun-Hee, Song. Hee-Sung, Kim. Jae-Hwan, Lee. Woo-Young, Lee. Soon-Ho, Park. Sun-Hee, Park. Hye-Ky 한국응용생명화학회 한국응용생명화학회지 4 Pages
한국응용생명화학회 한국응용생명화학회지 2005, Vol.48 No.4 331-334 (4 pages)
효율을 비교하기 위해 수행하였다. 원료 옥수수 및 이를 가공한 시료들로부터 DNA추출을 하였으며, 추출된 DNA의 형상, 농도 및 순도 측정 그리고 PCR 분석 결과를 비교하였다. 5가지 방법으로 옥수수의 DNA를 추출한 결과, 추출방법에 따른 DNA 형상의 차이가 거의 없는 것을 확인하였으나, 각각의 시료들로부터 추출된 DNA의 양은 시료 g당 $0.25{mu}g$부터 $234.0{mu}g$까지 매우 다양하게 나타났다. 5가지 방법으로 옥수수 시료들의 DNA를 추출한 결과, CTAB법과 DNeasy plant Maxi 키트를 이용한 DNA 추출방법이 높은 수율을 보였다. -
유전자재조합 감자의 검정을 위한 DNA분리 및 PCR검출의 최적조건 탐색
신원선, 김명희, Shin. Weon-Sun, Kim. Myung-Hee 한국식품과학회 한국식품과학회지 7 Pages
한국식품과학회 한국식품과학회지 2003, Vol.35 No.4 591-597 (7 pages)
산물인 216bp의 산물이 냉동감자가공품과 감자칩에서 검출되었으며 재조합유전자인 New leaf plus 유래의 증폭산물(234bp)와 New lear Y유래의 증폭산물(225bp)는 검출되지 않았다. 본 실험의 결과 시료의 가공특성과 적용한 추출 kit 및 방법에 따라 genomic DNA 순도 및 추출수율이 크게 차이가 났으며 이것이 결국 PCR 결과에 의음성 혹은 의양성 등에 영향을 미치게 될 것으로 판단된다. 또한, 동일한 DNA추출방법에 의해서도 DNA가 추출되지 않은 경우가 있어서 동일한 시료에서 2회 반복 추출하는 것이 의음성결과를 피할 수 있는... -
DNA 직접추출법에 따른 산림토양 부식층 내 세균군집의 계통학적 다양성 비교
손희성, 한송이, 황경숙, Son. Hee-Seong, Han. Song-Ih, Whang. Kyung-Sook 한국미생물학회 미생물학회지 7 Pages
한국미생물학회 미생물학회지 2007, Vol.43 No.3 210-216 (7 pages)
의래 추출된 DNA를 대상으로 계통학적 군집해석을 수행한 결과가 보다 더 다양한 계통군을 검출할 수 있음이 밝혀졌다. 한편, ISOIL kit를 이용하여 구축된 총clone중 약40%가${alpha}-proteobacteria$ 계통군에 속하였으며, 약 30%가 ${gamma}-Proteobacteria$ 계통군에 속하여 우점 계통군으로 확인된 반면, manual법에 의해 구축된 clone의 41%가 Acidobacteria 계통군에 속하였고 ${alpha}-proteobacteria$(28%)가 우점 계통군으로 분포하는 계통학적 특징을 나타내어 DNA추출법에 따라 토양 세균군집 구조의 계통학적 특성 이...


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