Field experiment was performed to investigate water and nutrient mass balances in paddy field with groundwater irrigation from May to October, 2001. The total water inflow was about 1,183mm in which rainfall, overflow from upstream paddy, and groundwater irrigation accounted for 43, 30, and 27%, respectively. Notice that the precipitation of the study period was less than the average annual precipitation. The total drainage was almost balanced with the inflow and more than half of it was occurred by surface drainage. From the nutrient mass balance analysis, the T-P output (17.56kg/ha) was estimated slightly lower than the input (20.90kg/ha) and the T-N output (130.41kg/ha) was slightly greater than the input(129.24kg/ha). However, the difference was within the expectation and the nutrient mass was thought to be balanced considering uncertainties in field experiment and other activities not included in the study such as algae and soil microorganisms. The surface discharge of nutrient, which was about 10% of total nutrient output, was mainly affected by fertilization and rainfall runoff. Therefore, prudent surface drainage plan might be necessary particularly for the fertilization period to prevent degradation of receiving water quality. The study was performed under abnormally low rainfall compared to the average annual rainfall record, and further monitoring in diverse rainfalls and irrigation methods is recommended to estimate nutrient behavior in the paddy field more reasonably.