To comply with stringent exhaust emission standards, it is necessary to reserch on some better quality of automotive fuels. Sulfur in fuels is sulfur compound by DOC and then it caused to the increase of PM on the surface of the catalyst. This research is focused on diesel emission characteristics and poisoning effect on Diesel Oxidation Catalyst when Ultra Low Sulfur Diesel(ULSD) and biodiesel are applied simultaneously. The biodiesel is used to improve viscosity of fuel specially in fuel injection system of engine since the introduction of ULSD may degrade viscosity in the process of desulfurization. Furthermore, this study may provide some basic data for the design of emissions reduction technology.