The separated three-phase flux-coupling type superconducting fault current limiter(SFCL) is composed of a series transformer and superconducting unit of the YBCO coated conductor. The primary and secondary coils in the transformer were wound in series each other through an iron core and the YBCO coated conductor was connected with secondary coil in parallel. In this paper, we investigated the current limiting characteristics through winding number of coil 2 and winding direction in the flux-coupling type SFCL. Through the analysis, it was shown that additive polarity condition and lower winding number of coil 2 have advantaged from the point of view of fault current limiting and burned of YBCO coated conductor.