In this paper, new algorithm which calculates transmission coefficient of electromagnetic wave by numerical analysis of scattered field by conductors with arbitrary cross-sections in parallel-plate waveguide is proposed. Proposed algorithm assumes magnetic current distribution on the boundary of scattering conductors, and applies Image theorem to perfect conductor surfaces of parallel-plate waveguide. Integral equations for fictitious magnetic currents on conducting boundary are set up. Magnetic current distributions on conducting boundary are expanded as exponential basis function, and using Galerkin method matrix equations are set wp. To compute matrix elements this method utilizes Fourier transform which is faster than numerical integration. Finally, frequency and incidence-angle characteristic of transmission coefficient are calculated and compared with experimental results.