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A Statistical Thermodynamic Study on the Conformational Transition of Oligopeptide Multimer
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  • A Statistical Thermodynamic Study on the Conformational Transition of Oligopeptide Multimer
  • A Statistical Thermodynamic Study on the Conformational Transition of Oligopeptide Multimer
저자명
김용구,박형석,Kim. Yong Gu,Park. Hyeong Seok
간행물명
Bulletin of the Korean Chemical Society
권/호정보
1996년|17권 2호|pp.131-138 (8 pages)
발행정보
대한화학회
파일정보
정기간행물|ENG|
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기타
이 논문은 한국과학기술정보연구원과 논문 연계를 통해 무료로 제공되는 원문입니다.
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기타언어초록

The conformational transition of oligopeptide multimer,-(HPPHPPP)n-, is studied (H:hydrophobic amino acid, P:hydrophilic amino acid). The helix/coil transitions are detected in the multimer. The transition depends on the number of amino acid in the sequence, the concentration of the oligopeptide, and temperature which affects helix stability constant (${xi}$) and hydrophobic interaction parameter (wj). In the thermodynamic equilibrium system jA${ ightarrow}$Aj (where A stands for oligopeptide monomer), Skolnick et al., explained helix/coil transition of dimer by the matrix method using Zimm-Bragg parameters ${xi}$ and $sigma$ (helix initiation constant). But the matrix method do not fully explain dangling H-bond effects which are important in oligopeptide systems. In this study we propose a general theory of conformational transitions of oligopeptides in which dimer, trimer, or higher multimer coexists. The partition of trimer is derived by using zipper model which account for dangling H-bond effects. The transitions of multimers which have cross-linked S-S bonds or long chains do not occur, because they keep always helical structures. The transitions due to the concentration of the oligopeptides are steeper than those due to the chain length or temperature.