The damage caused in the processes and distributions after harvesting the fruits and vegetables is attributed to the mechanical factors such as compressive and impact forces. Compression tests of biological materials provide an objective method for determining the apparent modulus of elasticity and mechanical properties which are significant in quality evaluation and control, and them maximum allowable compressive forces for minimizing mechanical damage. This study was performed to determine the mechanical properties of apple and pear, and to investigate effect of specimen shapes on the mechanical properties of them. A computer program was developed for measuring the mechanical properties and analyzing the data obtained from the measurement. Compression tests on the sample were performed with then replications at each treatment and at 25 mm/min loading rate. Mechanical properties of the apple was generally shown the higher value than those of the pear, and it was though that data obtained form the cylindrical specimen removed from the sample was more reliable than from the specimen cut in half.