In this study, the advanced shift control algorithm for parallel type hybrid drivetrain system with automated manual transmission(AMT) is proposed. The AMT can be easily realized by mounting the pneumatic actuators and sensors on the clutch and shift levers of the conventional manual transmission. By using the electronic-controlled AMT, engine and induction machine, it is possible to achieve the integrated control of overall system for the efficiency and the performance of the vehicle. Performing the speed control of the induction machine and the engine, the synchronization at gear shifting and the smooth engagement of clutch can be guaranteed. And it enables to reduce the shift shock and shorten the shift time. Hence, it results in the improvement of shift quality and the driving comfort of the vehicle. Dynamometer-based experiments are carried out to prove the validity of the proposed shift control algorithm.