The aim of the work is to present a new method of estimating the existence of a mass unbalance and mass unbalance under a crack on a rotating shaft. This is an advanced new method for the detection of a mass unbalance and a new way to estimate the position of it under crack influence. As the first step, the shaft is physically modelled with a finite element method and the dynamic mathematical model is derived by using the Hamilton principle; thus, the system is represented by various subsystems. The equation of motion of the shaft with a mass unbalance and a crack are established by adapting the local mass unbalance and the stiffness change. this is a reference system for the given system. Based on a model for transient behavior induced from vabrations measured at the bearings, an elementary Estimator is designed to detect mass unblance on the shaft. Using the Estimator, a bank of the Estimator is established to estimate the estimate the position of the mass unbalance and arranged at a certain location on the shaft. The informations for the given system are the measurements of bearing displacements and velocity.