Recently, the development of an airship that flies through the stratosphere was undertaken in Korea by Korea Aerospace Research Institute like other countries. With the consideration of new operation concept, it is on the rise that the current certification requirements and operation system is not sufficient to secure safety and reliability. This study was performed to establish the certification requirements and operation system. The amendment of airworthiness standards was reviewed by each articles, and the new procedures, as a level of national regulations, for operation was proposed. The results gained through this study can be utilized effectively in the development and operation of subjected airship.