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Classification of Human Papillomavirus (HPV) Risk Type via Text Mining
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  • Classification of Human Papillomavirus (HPV) Risk Type via Text Mining
  • Classification of Human Papillomavirus (HPV) Risk Type via Text Mining
저자명
Park. Seong-Bae,Hwang. Sohyun,Zhang. Byoung-Tak
간행물명
Genomics & informatics
권/호정보
2003년|1권 2호|pp.80-86 (7 pages)
발행정보
한국유전체학회
파일정보
정기간행물|ENG|
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이 논문은 한국과학기술정보연구원과 논문 연계를 통해 무료로 제공되는 원문입니다.
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기타언어초록

Human Papillomavirus (HPV) infection is known as the main factor for cervical cancer which is a leading cause of cancer deaths in women worldwide. Because there are more than 100 types in HPV, it is critical to discriminate the HPVs related with cervical cancer from those not related with it. In this paper, the risk type of HPVs using their textual explanation. The important issue in this problem is to distinguish false negatives from false positives. That is, we must find high-risk HPVs as many as possible though we may miss some low-risk HPVs. For this purpose, the AdaCost, a cost-sensitive learner is adopted to consider different costs between training examples. The experimental results on the HPV sequence database show that the consideration of costs gives higher performance. The improvement in F-score is higher than that of the accuracy, which implies that the number of high-risk HPVs found is increased.