During summer, the DIN (dissolved inorganic nitrogen) and DIP (dissolved inorganic phosphate) observed in the Jindong Bay in the southern sea of Korea show much higher values in the inner area of the bay. In general, they have high values in the upper (0-1 m) and lower layers (8 m-bottom), but are relatively lower in the middle layer (1-8 m). These features in their distribution are examined using an ecosystem model with considering the wind, tidal current, horizontal gradient of water density and residual flow. The experiments were focused on how to influence nutrients associated with these conditions. In the experiment with tide-induced residual flow, the values of nutrients appeared lower than the observation, and were well corresponded to it when the effects of wind, tide-induced residual current and horizontal gradient of water density were additionally imposed. A statistical analysis identifies these results. This paper suggests that variation of nutrient in the Jindong Bay during summer should be seriously a(footed wind-driven current by the wind and density-driven current is induced by the horizontal gradient of water density as well as tidal current.