In a HTS transformer, the perpendicular component of magnetic flux density ($B_r$) applied to HTS tapes of pancake windings becomes larger than that of solenoid winding, thereby decreasing the critical current in the HTS tapes. This paper introduces several methods to reduce $B_r$ applied to the HTS tapes in the transformer with double pancake windings by changing winding arrangements and the relative permeability of flux diverters. We have conducted a winding design for a single-phase 1MVA 22.9kV/6.6kV HTS transformer. We observed a change of $B_r$ due to a variation of gap-length between the high voltage windings and the low voltage windings, reciprocal arrangement and an increase of the number of the high voltage pancake. We also observed a change of Br on the HTS tapes due to variation of the relative permeability of flux diverters placed between the high voltage winding and the low voltage winding. Finally, we have designed a 1MVA 22.9kV/6.6kV HTS transformer winding using suggested methods and calculated transformer parameters by the 3D finite element method.