In this paper, we designed the PC-based analyzer of the power spectral density that could estimate the heart rate variability from time series data of R-R interval. The power spectral density estimated that it applied the autoregressive model to the measured electrocardiogram during a short period. Also, the characteristics of the designed analyzer are that it could process of the signal filtering, the generation and recomposition of time series and the feature extraction at the same time. Especially the analyzer reconstructed which applied the lowpass filter of the time series composed by the linear interpolation so as to enhance the signal-to-noise feature. We could estimate the power spectral density that confirmed a variety of power peak with low frequency range and high frequency rang of autonomic nerve by the heart rate variability.