This paper is concerned with a control allocation strategy using the dynamic inversion and the pseudo inverse control which generates the nominal control input trajectories, and autopilot design using time-varying control technique which is time-varying version of pole placement of linear time-invariant system for an agile missile with aerodynamic fin and thrust vectoring control. Control allocation of this paper is capable of extracting the maximum performance from each control effector, aerodynamic fin and thrust vectoring control, by combining the action of them. Time-varying control technique for autopilot design enhance the robustness of the tracking performance for a reference command. The main results are validated through the nonlinear simulation.