This study constructed a 3D real-time numerical model that predicts the water quality and movement characteristics of the inner bay, considering the characteristics of the wind-driven current and density current in estuaries, generated by the river discharge from the Hyeong-san river and oceanic water of the Eastern sea. The numerical model successfully calculated the seawater circulation current of Yeong-il Bay, using the input conditions oj the real-time tidal current, river discharge, and weather conditions during March 2001. This study also observed the wind-driven current and density current in estuaries that are effected by the seawater circulation pattern of the inner bay. We investigated and analyzed each impact factor, and its relationship to the water quality of Yeong-il bay.