Three different virgin and used activated carbons made of each coal(Calgon), coconut(Samchully) and wood(Picabiol) based activated carbons, and the activated carbons with treated with cetyltrimethylammonium chloride(CTAC) were tested for an adsorption performance of perchlorate in a continuous adsorption column. Breakthrough behavior was investigated for the virgin coal-, coconut-, wood-based activated carbons and the activated carbons with pretreatment with CTAC. The breakthrough points of the virgin coal-, coconut- and wood-based activated carbons were observed as 288 bed volume(BV), 719 BV and 2301 BV respectively. And the breakthrough points of the virgin coal-, coconut- and wood-based activated carbons with treated with CTAC were 5753 BV, 18409 BV and 31640 BV respectively. By using pretreatment with CTAC for the virgin activated carbons, the breakthrough point could be extended up to 25 times approximately. The breakthrough behavior was also investigated for used activated carbons(3.1 years) with and without treated with CTAC. The reported results of breakthrough points of with treated with CTAC were 5 times higher than those of without pretreatment with CTAC. Adsorption capacity(X/D) of the virgin coal-, coconut- and wood- based activated carbons, and the activated carbons with pretreatment with CTAC was observed. The experimental results of adsorption capacity showed that coal- based activated carbon was highest$(768.2{mu}g/g)$, coconut- based activated carbon was intermediate$(299{mu}g/g)$ and wood- based activated carbon was lowest$(99.2{mu}g/g)$. And the adsorption capacity of the virgin coal-, coconut- and wood activated carbons with pretreatment with CTAC was shown as 8303.7, 4478.8 and $1152.5{mu}g/g$ respectively. Moreover, carbon usage rates(CURs) for the activated carbons had been also investigated. The results of CURs for the virgin coal-, coconut- and wood- based activated carbons were shown as 0.71g/day, 2.16g/day and 3.45g/day respectively. and the virgin coal-, roconut- and wood- based activated carbons with pretreatment CTAC were shown as 0.05g/day, 0.08g/day and 0.17g/day respectively. The constant characteristic of the system, k values for coal-, coconut- and wood- based activated carbons were found to be 307.2, 102.5 and 94.2, respectively. And k values for coal-, coconut- and wood- based activated carbons with pretreatment CTAC were found to be 1781.7, 997.6 and 461.9 respectively Consequently, the results presented in this paper provided a better insight into the adsorption performance of perchlorate. This observation suggested that using the virgin activated carbon made of coal was the best selection for removal of percholrate in the water treatment for an advanced treatment. And when the activated carbons were treated with CTAC, higher removal efficiency for perchlorate in the water can be obtained.