In recent, stern wedges and stern flaps are installed for the improvement of propulsion and resistance performance of fast-ferry. For example, U.S. Navy has achieved the development of stern wedges and stern flaps for destroyer to enhance powering performance. It is generally known that stern wave systems as well as bow wave systems play an important role in the wave making resistance performance for fast-ferry. The bow diverging wave system has been usually simulated by an interface tracking method (ITM). However, it is difficult to apply the ITM to the numerical simulation of the stern wave and spray phenomenon because of over-turning wave and wave-breaking. Therefore, to solve this problem an interface capturing method (ICM) is introduced. In the present study, a numerical method with the ICM is developed to evaluate the resistance performance of fast-ferry. Incompressible Navier-Stokes and continuity equations are employed in the present study and the equations are discretized by Finite Difference Method in the general curvilinear coordinate system. CIP (Constrained Interpolated Profile) method is used for the discretization of convection terms, respectively. The free surface location is determined by level set method. In order to validate the numerical method, numerical simulations for Wigley hull are performed and their results are compared with experimental results. Several numerical simulations of ship waves for fast-ferry are performed to find advantages of appendage installation. Through those simulations, the computed results, such as wave profile and resistance coefficient, are compared with the measured results which are achieved from Samsung Ship Model Basin (SSMB). The effects of transom appendage on the resistance performance are discussed with the computed results in this study.