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Inferring genetic regulatory networks of the inflammatory bowel disease in human peripheral blood mononuclear cells
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  • Inferring genetic regulatory networks of the inflammatory bowel disease in human peripheral blood mononuclear cells
  • Inferring genetic regulatory networks of the inflammatory bowel disease in human peripheral blood mononuclear cells
저자명
Kim. Jin-Ki,Lee. Do-Heon,Yi. Gwan-Su
간행물명
Bioinformatics and Biosystems
권/호정보
2007년|2권 2호|pp.71-74 (4 pages)
발행정보
한국생물정보시스템생물학회
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정기간행물|ENG|
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이 논문은 한국과학기술정보연구원과 논문 연계를 통해 무료로 제공되는 원문입니다.
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기타언어초록

Cell phenotypes are determined by groups of functionally related genes. Microarray profiling of gene expression provides us response of cellular state to its perturbation. Several methods for uncovering a cellular network show reliable network reconstruction. In this study, we present reconstruction of genetic regulatory network of inflammation bowel disease in human peripheral blood mononuclear cell. The microarray based on Affymetrix Gene Chip Human Genome U133 Array Set HG-U133A is processed and applied network reconstruction algorithm, ARACNe. As a result, we will show that inferred network composed of 450 nodes and 2017 edges is roughly scale-free network and hierarchical organization. The major hub, CCNL2 (cyclin A2), in inferred network is shown to be associated with inflammatory function as well as apoptotic function.