Due to increasing need for better emission characteristics and lower fuel consumption rate in automotive engines, alternative fuels are drawing more attentions recently. The GTL (gas to liquid) is the one of most favored candidates. In this study, emission characteristics are compared between diesel and GTL fuel in commercial 2.0 liter diesel engine and vehicle with CRDi(Common Rail Direct injection) system. The effects of injection timings on emission and fuel consumption rate are compared at various engine speeds and loads. Noticeable reduction in HC, CO and PM emissions are observed due to higher cetane number and low sulfur and aromatic contents in GTL. On the trade-off curve of NOx and PM(Particulate matter) GTL showed much more benefits than diesel, where about 30% of PM mass decreased at the same operating conditions. On CVS 75 mode test in vehicle, GTL showed an excellent emission enhancement, in which 50% of HC, 21% of PM, and 12% of NOx engine-out emissions are decreased compared to ULSD(Ultra low sulfur diesel) fuel.