The number of marine accidents have been decreased since various equipments for navigation control have been introduced to the marine vessels. However, disastrous marine accidents such as ship collisions are occurred more frequently. Therefore, IMO(International Maritime Organization) is enforcing the design requirement of structural strength for marine vessel. Also EU countries are developing new design methodologies and design tools to suggest the design guidance which can minimize the damage of commercial vessels in case of marine collision accidents. In this study, an integrated design system for the safety assessment has been presented to enhance the safety of damaged ships in marine collision accidents. The architecture of system is described by use-cases and IDEF functional analysis. Then an integrated system for safety assessment of damaged ship which is considering both damage stability and structural safety has been developed to support the ship design in early stage.