A conduction-cooled superconducting magnet system is developed for material separation. The superconducting magnet for material separation has to be designed to have a strong magnetic field in a control volume. Since the magnetic field gradient is larger at the end rather than at the center of the magnet, we developed a design method to optimize the superconducting magnet for material separation. The safety of the superconducting magnet is evaluated, taking into account the electro-magnetic field, heat and structure. The superconducting coil is successfully wound by the wet-winding method. The superconducting coil is installed in a cryostat maintaining high vacuum, and cooled down to approximately 4 K by a two-stage GM cryocooler. The performance of the conduction-cooled superconducting magnet system is discussed with respect to the supplied current, cooling medium and cooling power of a cryocooler.