Nowadays, a precision multiple-beam epoch sounder is a depth-sounding apparatus, which is widely used especially for the mapping of bottom of the sea in the coastal area and the bed of river. However, there has been no attempt to verify the accuracy of the depth-sounding apparatus with the data obtained through the actual measurement. As a consequence, the efficient and systematic evaluation of the survey results cannot be performed. In this paper, the accuracy of the multiple beam echo sounder is analyzed by comparing the in-situ measurements and reference data. The test results show that the highest level of accuracy, indicated by IHO, can be achieved even though the magnitude of error increases with the depth of water.