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Distribution of Group A Rotavirus Genotypes Circulating in Gwangju, Korea
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  • Distribution of Group A Rotavirus Genotypes Circulating in Gwangju, Korea
  • Distribution of Group A Rotavirus Genotypes Circulating in Gwangju, Korea
저자명
Kim. Sun-Hee,Cheon. Doo-Sung,Jeong. Hye-Sook,Kim. Min-Ji,Kee. Hye-Young,Seo. Jin-Jong,Kim. Tae-Sun,Kim. Eun-Sun,Park. Jong-Tae,C
간행물명
Journal of bacteriology and virology : JBV
권/호정보
2009년|39권 1호|pp.21-28 (8 pages)
발행정보
대한미생물학회
파일정보
정기간행물|ENG|
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이 논문은 한국과학기술정보연구원과 논문 연계를 통해 무료로 제공되는 원문입니다.
서지반출

기타언어초록

To determine the distribution of rotavirus strain genotypes in Gwangju, Korea, we performed reverse-transcription polymerase chain reaction and nucleotide sequencing analysis using the 115 rotavirus EIA positive stool specimens collected from December 2006 through April 2007. The most predominant genotype was confirmed as G1P[8] (53.9%), followed by G3P[8] (29.6%), G4P[6] (8.7%), G2P[4] (4.3%) and G9P[8] (1.7%). A special attention is drawn to the unusual findings of the genotypes G11P[25] and G12P[9] during this study period. In order to investigate the phylogenetic relationships among the same or different genotypes, the nucleotide sequences of rotavirus circulating in Korea and the foreign countries were analyzed using MegAlign and Clustal X programme. The G11P[25] strain identified in this study showed the highest nucleic acid similarity with G11 /CUK1 /2006 /Korea (99.2%) and P[25] /Dhaka /2001 /BGD (98.7%). Meanwhile, the G12P[9] strain detected in this study shared $99.4{sim}99.5%$ nucleotide homology with the reference strain G12P[9] /CP1030 /2004 /Japan. This incidence of new rotavirus genotypes in our area illustrates the large diversity of rotavirus strains found worldwide. Therefore, the epidemiological surveillance of rotavirus may need to be continued in a wide geographic area.