With the increase of human activities since the Industrial Revolution, atmospheric greenhouse gas (GHG) concentration has increased, which is believed the cause of climate change. Methane ($CH_4$) fluxes were measured at two commercial swine barns (Jarvis and Guelph) with a four tower micrometeorological mass balance method. Two and three separate measurements were conducted at Jarvis and at Guelph, respectively. In the Jarvis experiments from May to July, mean $CH_4$ flux ($490.4{mu}g/m^2/s$) during daytime was lower than that during nighttime ($678.0{mu}g/m^2/s$) (p<0.05), which would be caused by break of slurry temperature stratification. In the Guelph experiment from January to April, mean $CH_4$ flux ($62.9{mu}g/m^2/s$) during daytime was higher than that during nighttime ($39.0{mu}g/m^2/s$) (p<0.05), which would be generated by high slurry temperature at 3 cm depth after April 6. Slurry temperature stratification in the Guelph experiment would happen from January to March.