It has been continuously noted that many sewage treatment concrete structures have deteriorated due to sulfur-oxidizing bacteria. There have been many reports on approaches to protecting concrete from this bacteria corrosion. The purpose of this study is to evaluate the inhibition of growth of a sulfur-oxidizing bacterium by a antifungal agent such as $NiSO_4{cdot}6H_2O$, and the characteristics of polymer cement mortar using nickel type antifungal agent. First, we developed antifungal agents using metal nickel and $NiSO_4{cdot}6H_2O$ to inhibit the growth of thiobacillus novellus, which is the sulfur-oxidizing bacteria in concrete. Then, ordinary cement mortar and polymer cement mortar using nickel type antifungal agent with various polymer-cement ratios, and antifungal agent content were prepared, and were tested for the antifungal adding effect, compressive and flexural strengths, expansion and leaching of nickel ion. From the test results, it was confirmed that the adding of an antifungal agent has an inhibition effect on the growth of sulfur-oxidizing bacteria at antifungal agent contents of 20 mM or more. In addition, the strengths and expansion of polymer cement mortars are not significantly changed by the addition of an antifungal agent. Therefore, the nickel-type antifungal agent developed in this study can be used to improve the durability of reinforced concrete hume pipe in the construction industry.