This paper mainly proposes the protective coordination scheme of the microgrid system. The microgrid protection is identical to the conventional protection system separating the normal part and contingency part to reduce damage when the contingency occur at power cables, facilities. But they are different in the protection type. The conventional protection system only considers unidirectional current. However the microgrid protection should be considered not only unidirectional current but also backfeed current because various microsources and loads are installed in the microgrid system. In case the contingency occurs in microsource, when microgrid is interconnected to grid, the protection system should be configured to not separate microgrid from grid before the microsource is isolated to microgrid. And in case of fault occur in power system, the microsources should not isolated to microgrid before the static switch at PCC is tripped to separate from power system. Considering these characteristic of microgird, this paper proposes the protective coordination scheme of microgrid and implemented the on-line real time monitoring system. Especially in case the microgrid is connected to low voltage distribution system with 220/380V voltage level, the proposed protection method with power IT technology can solve the problems when the existing protective devices only applied to the microgrid system.