Fiber quality is very important for all the steps of the textile area. Underwater shock wave has been utilized for metal, wood, food processing and medical applications and renewed and increased application during the last decade. The main object of this study, is to demonostrate underwater shock wave as a surface treatment of natural fibers such as jute and cotton in form of yarn and to report characterized properties of the treated fibers. The underwater shock wave was generated by the explosion of the detonation fuse in the water tank. The process of bubble generation and expansion inside the water results in the formation of shock wave. Natural fibers were exposed to shock wave treatment depending on the different pressures and detonatinon fuse separation distance. After shock-loading, fibers were selected for physico-mechanical and physico-chemical tests such as Scaning Elecron Microscopy (SEM) analysis, breaking strength, moisture behavior, permeability and wicking test. The maximum effect with improved moisture content, permeabilty and wicking properties were observed from 100 MPa. The treated fiber showed high performance necessary for use in woven and non woven purpose.