Objectives: To report the effect of oriental medicine on 2 patients with secondary amenorrhea caused by autoimmune disease and thyroid grand disease. Methods: The patients who had secondary amenorrhea caused by autoimmune disease and thyroid grand disease were treated with the oriental medical treatments such as herbal medication, herbal acupuncture and moxibustion therapy. Results: After the oriental medical treatments, the patients could have their menstrual cycle again and menstrual condition was also improved. Conclusion: This case report shows that the oriental medical therapy is effective for curing secondary amenorrhea caused by autoimmune disease and thyroid grand disease.