Several problems occurred due to the use of the wrong water cycle system in the watershed. This was caused by a dry stream in the lower parts of the tributaries and the deterioration in value of usage by water pollution in accordance with water storage. This was maintained for a long period of time in the reservoir which secured the agricultural water. As a result of the operational status in the agricultural reservoirs focused on Chungcheongnam-do and Daejeon metropolitan city, a dry stream appeared because hydraulic retention time(HRT) in the majority of reservoirs was maintained for 8 months of the year. The water quality in the agricultural reservoir was fairly related to the water cycle system due to rainfall and input of pollutants from the population and livestock in the watershed. Consequently, the storage water volume and the time period of the water in the reservoir should be controlled by the reduction of the pollution load in the water and the prevention of a dry stream. Also, the water cycle system in the watershed should be improved by maintaining a short HRT of the reservoir.