It is difficult to obtain the accurate and homogeneous height information over the whole Korea due to the effect of different vertical datums have been divided into land and sea part. In this study, we tried to unify the different vertical datums using the precise spirit leveling between TBM (tidal bench mark) and BM (bench mark) in order to solve the problems caused by different vertical datums. For this, the vertical datum offsets at observed points which were calculate from leveling results and then transformation model of vertical datum will be modelled using calculated offsets along the coastal line. For suggesting the precise modelling method to vertical datum transformation, we analyzed results from various interpolation methods such as Spline and LSC method. As the results from analysis, the LSC method combined with 4-parameters trend model is more suitable for modelling the offsets between vertical datums. The final transformation model of vertical datum using the combination of LSC and 4-parameter model which provides the transformation accuracies of ${pm}10.4cm{sim}14.8cm$ level. And, the software for vertical datum transformation that was also developed using the final model in order to convert the height information included in various spatial data effectively. Therefore, the transformation model between vertical datums of land and sea part, which is developed in this study, is expected to minimize the confusion caused by mismatch of height information in the use of spatial data, and it also can be minimize economic and time losses in various application fields such as coastal development project, coastal disaster prevention, etc.