The purpose of this study is to propose the proper fillet welding process for preventing the buckling distortion in thin panel welded structure. In order to do it, a heat input model for laser hybrid welding process was developed using FEA and experiment. The principal factors controlling the angular distortion and longitudinal shrinkage force caused by FCA and laser hybrid welding were identified as the welding heat input and weld rigidity using FEA. The predictive equations of angular distortion and longitudinal shrinkage force for each welding process were formulated as a function of the principal factors proposed. With the predictive equations, the buckling distortion at the thin panel welded structure with welding process was evaluated and compared using nonlinear buckling analysis and STEM(simplified thermo elastic method). Based on the results, the best way to prevent the buckling distortion at the given welded panel structures was identified as an intermittent FCA welding.