Marine caused pollution occurs mostly near coastal area and its main cause was known to be human feces issued from small vessels. To sterilize liquid pollutants from portable toilets of small vessels, an electrolysis treatment is judged to be the most economic and stable method considering an environment of its use. In this paper, we presents an electrolysis apparatus which is the most appropriate for sterilizing pollutants from portable toilets of small vessels and derives the minimum operating time of the apparatus for sterilizing norovirus which is a main target of marine caused pollution sources. In order to utilize renewable energy, we designed an apparatus which generates a renewable energy from solar cells. As a result, we could confirm the applicability of the proposed system with the results from experiments in three cases of different weather conditions.