In Yongwon channel, its natural flow of seawater is blocked by the construction of Busan Newport including the container berth. The channel was transformed into a narrow and long one, where it is possible that ships are only allowed to pass through the north-side channel of Gyeonmado located at the point of river mouth to Songjeongcheon. In addition, Yongwon channel is approximately 100 m wide on average and 3,600 m long, which has the highest slenderness ratio (length/width=36). So it is considered that the changes in the terrain characteristics of Yongwon channel is likely to alter the circulation of sea water, thereby changing its water quality. In this study, the seasonal change and the spatial variation of the water quality in Yongwon channel was analyzed for the effect of land pollution using the measurement data. The mass balance calculation method is used to analyze the water pollution resulting from sediment pollutants. This result shows that the improvement of the water quality in Yongwon channel can be obtained from the sewer pipe modification and the environmental dredging.